Package: qcQpcr 1.5

qcQpcr: Histone ChIP-Seq qPCR Analyzer

Quality control of chromatin immunoprecipitation libraries (ChIP-seq) by quantitative polymerase chain reaction (qPCR). This function calculates Enrichment value with respect to reference for each histone modification (specific to 'Vii7' software <http://www.thermofisher.com/ca/en/home/life-science/pcr/real-time-pcr/real-time-pcr-instruments/viia-7-real-time-pcr-system/viia-7-software.html>). This function is applicable to full panel of histone modifications described by International Human Epigenomic Consortium (IHEC).

Authors:Alireza Lorzadeh

qcQpcr_1.5.tar.gz
qcQpcr_1.5.zip(r-4.5)qcQpcr_1.5.zip(r-4.4)qcQpcr_1.5.zip(r-4.3)
qcQpcr_1.5.tgz(r-4.4-any)qcQpcr_1.5.tgz(r-4.3-any)
qcQpcr_1.5.tar.gz(r-4.5-noble)qcQpcr_1.5.tar.gz(r-4.4-noble)
qcQpcr_1.5.tgz(r-4.4-emscripten)qcQpcr_1.5.tgz(r-4.3-emscripten)
qcQpcr.pdf |qcQpcr.html✨
qcQpcr/json (API)

# Install 'qcQpcr' in R:
install.packages('qcQpcr', repos = c('https://alorzadeh.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.00 score 4 scripts 93 downloads 1 exports 28 dependencies

Last updated 7 years agofrom:c1fe985a1f. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKOct 17 2024
R-4.5-winOKOct 17 2024
R-4.5-linuxOKOct 17 2024
R-4.4-winOKOct 17 2024
R-4.4-macOKOct 17 2024
R-4.3-winOKOct 17 2024
R-4.3-macOKOct 17 2024

Exports:qcQpcr

Dependencies:clicolorspacefansifarverggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerrlangscalestibbleutf8vctrsviridisLitewithr