Package: qcQpcr 1.5
qcQpcr: Histone ChIP-Seq qPCR Analyzer
Quality control of chromatin immunoprecipitation libraries (ChIP-seq) by quantitative polymerase chain reaction (qPCR). This function calculates Enrichment value with respect to reference for each histone modification (specific to 'Vii7' software <http://www.thermofisher.com/ca/en/home/life-science/pcr/real-time-pcr/real-time-pcr-instruments/viia-7-real-time-pcr-system/viia-7-software.html>). This function is applicable to full panel of histone modifications described by International Human Epigenomic Consortium (IHEC).
Authors:
qcQpcr_1.5.tar.gz
qcQpcr_1.5.zip(r-4.5)qcQpcr_1.5.zip(r-4.4)qcQpcr_1.5.zip(r-4.3)
qcQpcr_1.5.tgz(r-4.4-any)qcQpcr_1.5.tgz(r-4.3-any)
qcQpcr_1.5.tar.gz(r-4.5-noble)qcQpcr_1.5.tar.gz(r-4.4-noble)
qcQpcr_1.5.tgz(r-4.4-emscripten)qcQpcr_1.5.tgz(r-4.3-emscripten)
qcQpcr.pdf |qcQpcr.html✨
qcQpcr/json (API)
# Install 'qcQpcr' in R: |
install.packages('qcQpcr', repos = c('https://alorzadeh.r-universe.dev', 'https://cloud.r-project.org')) |
- SampleTest - QPCR ChIP-seq Results
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 7 years agofrom:c1fe985a1f. Checks:OK: 7. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 16 2024 |
R-4.5-win | OK | Nov 16 2024 |
R-4.5-linux | OK | Nov 16 2024 |
R-4.4-win | OK | Nov 16 2024 |
R-4.4-mac | OK | Nov 16 2024 |
R-4.3-win | OK | Nov 16 2024 |
R-4.3-mac | OK | Nov 16 2024 |
Exports:qcQpcr
Dependencies:clicolorspacefansifarverggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerrlangscalestibbleutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Histone ChIP-Seq qPCR Analyzer Histone ChIP-Seq qPCR Analyzer | qcQpcr-package |
Histone ChIP-Seq qPCR Analyzer | qcQpcr |
qPCR ChIP-seq Results | SampleTest |